ko00010 - Glycolysis / Gluconeogenesis

ko00020 - Citrate cycle (TCA cycle)

ko00030 - Pentose phosphate pathway

ko00052 - Galactose metabolism

ko00061 - Fatty acid biosynthesis

ko00130 - Ubiquinone and other terpenoid-quinone biosynthesis

ko00230 - Purine metabolism

ko00240 - Pyrimidine metabolism

ko00250 - Alanine, aspartate and glutamate metabolism

ko00260 - Glycine, serine and threonine metabolism

ko00270 - Cysteine and methionine metabolism

ko00281 - Geraniol degradation

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00300 - Lysine biosynthesis

ko00340 - Histidine metabolism

ko00400 - Phenylalanine, tyrosine and tryptophan biosynthesis

ko00430 - Taurine and hypotaurine metabolism

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00480 - Glutathione metabolism

ko00520 - Amino sugar and nucleotide sugar metabolism

ko00521 - Streptomycin biosynthesis

ko00540 - Lipopolysaccharide biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00564 - Glycerophospholipid metabolism

ko00620 - Pyruvate metabolism

ko00630 - Glyoxylate and dicarboxylate metabolism

ko00633 - Nitrotoluene degradation

ko00640 - Propanoate metabolism

ko00650 - Butanoate metabolism

ko00660 - C5-Branched dibasic acid metabolism

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00720 - Carbon fixation pathways in prokaryotes

ko00730 - Thiamine metabolism

ko00740 - Riboflavin metabolism

ko00750 - Vitamin B6 metabolism

ko00760 - Nicotinate and nicotinamide metabolism

ko00770 - Pantothenate and CoA biosynthesis

ko00780 - Biotin metabolism

ko00785 - Lipoic acid metabolism

ko00790 - Folate biosynthesis

ko00791 - Atrazine degradation

ko00860 - Porphyrin and chlorophyll metabolism

ko00900 - Terpenoid backbone biosynthesis

ko00903 - Limonene and pinene degradation

ko00910 - Nitrogen metabolism

ko00920 - Sulfur metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko01040 - Biosynthesis of unsaturated fatty acids

ko01110 - Biosynthesis of secondary metabolites

ko02010 - ABC transporters

ko02020 - Two-component system

ko02030 - Bacterial chemotaxis

ko02040 - Flagellar assembly

ko03010 - Ribosome

ko03018 - RNA degradation

ko03030 - DNA replication

ko03060 - Protein export

ko03070 - Bacterial secretion system

ko03410 - Base excision repair

ko03430 - Mismatch repair

ko03440 - Homologous recombination

M00002 - Glycolysis, core module involving three-carbon compounds

M00003 - Gluconeogenesis, oxaloacetate => fructose-6P

M00004 - Pentose phosphate pathway (Pentose phosphate cycle)

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00006 - Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00008 - Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate

M00009 - Citrate cycle (TCA cycle, Krebs cycle)

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00015 - Proline biosynthesis, glutamate => proline

M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

M00017 - Methionine biosynthesis, apartate => homoserine => methionine

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00021 - Cysteine biosynthesis, serine => cysteine

M00022 - Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate

M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP

M00049 - Adenine ribonucleotide biosynthesis, IMP => ADP,ATP

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP

M00053 - Pyrimidine deoxyribonuleotide biosynthesis, CDP/CTP => dCDP/dCTP,dTDP/dTTP

M00060 - Lipopolysaccharide biosynthesis, KDO2-lipid A

M00061 - D-Glucuronate degradation

M00063 - CMP-KDO biosynthesis

M00064 - ADP-L-glycero-D-manno-heptose biosynthesis

M00083 - Fatty acid biosynthesis, elongation

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00116 - Menaquinone biosynthesis, chorismate => menaquinol

M00117 - Ubiquinone biosynthesis, prokaryotes, chorismate => ubiquinone

M00119 - Pantothenate biosynthesis, valine/L-aspartate => pantothenate

M00121 - Heme biosynthesis, glutamate => heme

M00122 - Cobalamin biosynthesis, cobinamide => cobalamin

M00123 - Biotin biosynthesis, pimeloyl-ACP/CoA => biotin

M00124 - Pyridoxal biosynthesis, erythrose-4P => pyridoxal-5P

M00126 - Tetrahydrofolate biosynthesis, GTP => THF

M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P

M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine

M00144 - NADH

M00149 - Succinate dehydrogenase, prokaryotes

M00150 - Fumarate reductase, prokaryotes

M00153 - Cytochrome bd ubiquinol oxidase

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00308 - Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P

M00364 - C10-C20 isoprenoid biosynthesis, bacteria

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00417 - Cytochrome o ubiquinol oxidase

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00530 - Dissimilatory nitrate reduction, nitrate => ammonia

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00542 - EHEC/EPEC pathogenicity signature, T3SS and effectors

M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00572 - Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP

M00573 - Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin

M00577 - Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00631 - D-Galacturonate degradation (bacteria)

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00714 - Multidrug resistance, efflux pump QacA

M00718 - Multidrug resistance, efflux pump MexAB-OprM

M00740 - Methylaspartate cycle

M00761 - Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N

M00793 - dTDP-L-rhamnose biosynthesis

M00843 - L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4

M00844 - Arginine biosynthesis, ornithine => arginine

M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine

M00846 - Siroheme biosynthesis, glutamate => siroheme

AA10

CBM50

GH102

GH103

GH2

GH23

GH24

GH3

GH32

GH73

GH90

GT19

GT2

GT26

GT28

GT30

GT4

GT51

GT56

GT73

GT83

GT9

Biofilm

Cell-to-cell spread

Cellular metabolism

Intracellular survival and replication

Invasion

Regulation of gene expression

Stress

Virulence

3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase (EC 2.3.1.245) (ID:SL1344_4027)

Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ID:Z4283)

Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) (ID:Z0038)

Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) (ID:Z0037)

Carbon starvation protein A (ID:SL1344_0588)

Chorismate synthase (EC 4.2.3.5) (ID:t0480)

Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) (ID:SL1344_0436)

D-sedoheptulose 7-phosphate isomerase (EC 5.3.1.28) (ID:SL1344_0306)

D-tagatose-1,6-bisphosphate aldolase subunit KbaY (EC 4.1.2.40) (ID:b3137)

Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) @ Dipeptide chemoreceptor (ID:c4361)

DTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) (ID:STM474_4103)

FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) (ID:STM474_3621)

Galactose/methyl galactoside ABC transporter, ATP-binding protein MglA (EC 3.6.3.17) (ID:Z3404)

GMP synthase [glutamine-hydrolyzing], amidotransferase subunit (EC 6.3.5.2) / GMP synthase [glutamine-hydrolyzing], ATP pyrophosphatase subunit (EC 6.3.5.2) (ID:S2725)

GTP-binding and nucleic acid-binding protein YchF (ID:c1661)

Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) (ID:SL1344_1828)

Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain (ID:STM2511)

Monothiol glutaredoxin GrxD (ID:E2348C_1740)

Phosphate transport system regulatory protein PhoU (ID:c4648)

Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) (ID:STM474_0956)

RNA polymerase-binding transcription factor DksA (ID:S0140)

Transketolase (EC 2.2.1.1) (ID:c3520)

Trk potassium uptake system protein TrkA (ID:Z4660)

Tryptophan synthase beta chain (EC 4.2.1.20) (ID:Z2550)

Uncharacterized protease YegQ (ID:SL1344_2112)

Zinc ABC transporter, permease protein ZnuB (ID:STM14_2302)

Undetected