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Weissella cibaria

Taxonomy

Image of organism in genus Weissella cibaria
Species:Weissella cibaria
Genus:Weissella
Family:Leuconostocaceae
Order:Lactobacillales
Class:Bacilli
Phylum:Firmicutes

 

Region Enrichment:Peru

Phenotypes

ShapeCoccus-shaped
Gram stainingGram+
Oxygen RequirementAerobe
EcosystemAnimal; Human
Ecosystem TypeUnclassified

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00061 - Fatty acid biosynthesis

ko00240 - Pyrimidine metabolism

ko00300 - Lysine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00730 - Thiamine metabolism

ko00900 - Terpenoid backbone biosynthesis

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko03030 - DNA replication

ko03060 - Protein export

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00006 - Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P

M00008 - Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate

M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine

M00017 - Methionine biosynthesis, apartate => homoserine => methionine

M00022 - Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate

M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00061 - D-Glucuronate degradation

M00086 - beta-Oxidation, acyl-CoA synthesis

M00095 - C5 isoprenoid biosynthesis, mevalonate pathway

M00116 - Menaquinone biosynthesis, chorismate => menaquinol

M00140 - C1-unit interconversion, prokaryotes

M00153 - Cytochrome bd ubiquinol oxidase

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00308 - Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P

M00364 - C10-C20 isoprenoid biosynthesis, bacteria

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00580 - Pentose phosphate pathway, archaea, fructose 6P => ribose 5P

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00840 - Tetrahydrofolate biosynthesis, mediated by ribA and trpF, GTP => THF

M00843 - L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4

M00844 - Arginine biosynthesis, ornithine => arginine

M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine

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Antibiotic resistance

erm

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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