| Species: | Clostridium perfringens |
|---|---|
| Genus: | Clostridium |
| Family: | Clostridiaceae |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Gut outflow: | 0.5 |
|---|---|
| Disease Association: |
Liver cirrhosis (ES=1) NAFLD (ES=0.306013) |
| Region Enrichment: | Madagascar, Thailand |
| Shape | Rod-shaped |
|---|---|
| Gram staining | Gram+ |
| Motility | Motile |
| Oxygen Requirement | Anaerobe |
| Sporulation | Sporulating |
| Ecosystem | Mammals; Terrestrial; Human; Unclassified; Wastewater; Birds |
| Ecosystem Type | Unclassified; Soil; Industrial wastewater; Circulatory system |
In the linked pathways:
red=enriched, blue=depleted
ko00010 - Glycolysis / Gluconeogenesis
ko00030 - Pentose phosphate pathway
ko00052 - Galactose metabolism
ko00061 - Fatty acid biosynthesis
ko00240 - Pyrimidine metabolism
ko00250 - Alanine, aspartate and glutamate metabolism
ko00270 - Cysteine and methionine metabolism
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00500 - Starch and sucrose metabolism
ko00511 - Other glycan degradation
ko00520 - Amino sugar and nucleotide sugar metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00620 - Pyruvate metabolism
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00780 - Biotin metabolism
ko00790 - Folate biosynthesis
ko00860 - Porphyrin and chlorophyll metabolism
ko00900 - Terpenoid backbone biosynthesis
ko00970 - Aminoacyl-tRNA biosynthesis
ko00983 - Drug metabolism - other enzymes
ko03010 - Ribosome
ko03030 - DNA replication
ko03060 - Protein export
ko03410 - Base excision repair
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00015 - Proline biosynthesis, glutamate => proline
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00021 - Cysteine biosynthesis, serine => cysteine
M00022 - Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
M00049 - Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00061 - D-Glucuronate degradation
M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00115 - NAD biosynthesis, aspartate => NAD
M00122 - Cobalamin biosynthesis, cobinamide => cobalamin
M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P
M00140 - C1-unit interconversion, prokaryotes
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00159 - V-type ATPase, prokaryotes
M00308 - Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00550 - Ascorbate degradation, ascorbate => D-xylulose-5P
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00627 - beta-Lactam resistance, Bla system
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00704 - Tetracycline resistance, efflux pump Tet38
M00705 - Multidrug resistance, efflux pump MepA
M00793 - dTDP-L-rhamnose biosynthesis
M00844 - Arginine biosynthesis, ornithine => arginine
Undetected
Undetected
Undetected
Lanthipeptide
MATLAB species model file: msp_0792.mat
