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Lactobacillus paragasseri

Taxonomy

Image of organism in genus Lactobacillus paragasseri
Species:Lactobacillus paragasseri
Genus:Lactobacillus
Family:Lactobacillaceae
Order:Lactobacillales
Class:Bacilli
Phylum:Firmicutes

 

Gut outflow:1
Disease Association:

Liver cirrhosis (ES=1)

Liver cirrhosis (ES=0.364394)

Melanoma (ES=1)

Type 2 diabetes (ES=0.305112)

Phenotypes

ShapeRod-shaped
Gram stainingGram+
MotilityNonmotile
Oxygen RequirementMicroaerophilic
EcosystemHuman
Ecosystem TypeReproductive system

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00052 - Galactose metabolism

ko00072 - Synthesis and degradation of ketone bodies

ko00240 - Pyrimidine metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00500 - Starch and sucrose metabolism

ko00521 - Streptomycin biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00710 - Carbon fixation in photosynthetic organisms

ko00730 - Thiamine metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko00983 - Drug metabolism - other enzymes

ko02060 - Phosphotransferase system (PTS)

ko03010 - Ribosome

ko03030 - DNA replication

ko03060 - Protein export

ko03410 - Base excision repair

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00006 - Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00095 - C5 isoprenoid biosynthesis, mevalonate pathway

M00134 - Polyamine biosynthesis, arginine => ornithine => putrescine

M00140 - C1-unit interconversion, prokaryotes

M00153 - Cytochrome bd ubiquinol oxidase

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00364 - C10-C20 isoprenoid biosynthesis, bacteria

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00627 - beta-Lactam resistance, Bla system

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00714 - Multidrug resistance, efflux pump QacA

M00793 - dTDP-L-rhamnose biosynthesis

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Antibiotic resistance

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Bacteriocin

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