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unclassified Oscillibacter

Taxonomy

Image of organism in genus unclassified Oscillibacter
Species:unclassified Oscillibacter
Genus:Oscillibacter
Family:Oscillospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:0.333
Region Enrichment:Non-westernized
(Fiji, Madagascar, Mongolia, Peru, Thailand, United Republic of Tanzania)

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00072 - Synthesis and degradation of ketone bodies

ko00260 - Glycine, serine and threonine metabolism

ko00450 - Selenocompound metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00785 - Lipoic acid metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00015 - Proline biosynthesis, glutamate => proline

M00021 - Cysteine biosynthesis, serine => cysteine

M00045 - Histidine degradation, histidine => N-formiminoglutamate => glutamate

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00159 - V-type ATPase, prokaryotes

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00627 - beta-Lactam resistance, Bla system

M00705 - Multidrug resistance, efflux pump MepA

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Cazyme

Antibiotic resistance

blab3

dfrA

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_0988.mat