| Species: | Candidatus Methanomethylophilus alvus / Methanoculleus sp. CAG:1088 |
|---|---|
| Genus: | Candidatus Methanomethylophilus |
| Family: | Methanomassiliicoccaceae |
| Order: | Methanomassiliicoccales |
| Class: | Thermoplasmata |
| Phylum: | Euryarchaeota |
| Disease Association: |
Colorectal cancer (ES=0.332061) |
|---|
In the linked pathways:
red=enriched, blue=depleted
ko00072 - Synthesis and degradation of ketone bodies
ko00250 - Alanine, aspartate and glutamate metabolism
ko00270 - Cysteine and methionine metabolism
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00400 - Phenylalanine, tyrosine and tryptophan biosynthesis
ko00450 - Selenocompound metabolism
ko00633 - Nitrotoluene degradation
ko00670 - One carbon pool by folate
ko00680 - Methane metabolism
ko00730 - Thiamine metabolism
ko00770 - Pantothenate and CoA biosynthesis
ko00785 - Lipoic acid metabolism
ko00860 - Porphyrin and chlorophyll metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko03010 - Ribosome
ko03020 - RNA polymerase
ko03030 - DNA replication
ko03410 - Base excision repair
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00015 - Proline biosynthesis, glutamate => proline
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00017 - Methionine biosynthesis, apartate => homoserine => methionine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00021 - Cysteine biosynthesis, serine => cysteine
M00023 - Tryptophan biosynthesis, chorismate => tryptophan
M00035 - Methionine degradation
M00048 - Inosine monophosphate biosynthesis, PRPP + glutamine => IMP
M00049 - Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00051 - Uridine monophosphate biosynthesis, glutamine (+ PRPP) => UMP
M00095 - C5 isoprenoid biosynthesis, mevalonate pathway
M00121 - Heme biosynthesis, glutamate => heme
M00127 - Thiamine biosynthesis, AIR => thiamine-P/thiamine-2P
M00140 - C1-unit interconversion, prokaryotes
M00144 - NADH
M00159 - V-type ATPase, prokaryotes
M00356 - Methanogenesis, methanol => methane
M00364 - C10-C20 isoprenoid biosynthesis, bacteria
M00365 - C10-C20 isoprenoid biosynthesis, archaea
M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00563 - Methanogenesis, methylamine/dimethylamine/trimethylamine
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00580 - Pentose phosphate pathway, archaea, fructose 6P => ribose 5P
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00704 - Tetracycline resistance, efflux pump Tet38
M00705 - Multidrug resistance, efflux pump MepA
M00836 - Coenzyme F430 biosynthesis, sirohydrochlorin => coenzyme F430
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
M00846 - Siroheme biosynthesis, glutamate => siroheme
M00849 - C5 isoprenoid biosynthesis, mevalonate pathway, archaea
Undetected
Undetected
Undetected
MATLAB species model file: msp_1018.mat
