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unclassified Lachnospiraceae

Taxonomy

Species:unclassified Lachnospiraceae
Genus:unclassified Lachnospiraceae
Family:Lachnospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Gut outflow:1
Disease Association:

Colorectal cancer (ES=0.465261)

Region Enrichment:United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00250 - Alanine, aspartate and glutamate metabolism

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00473 - D-Alanine metabolism

ko00520 - Amino sugar and nucleotide sugar metabolism

ko00521 - Streptomycin biosynthesis

ko00550 - Peptidoglycan biosynthesis

ko00710 - Carbon fixation in photosynthetic organisms

ko00970 - Aminoacyl-tRNA biosynthesis

ko02030 - Bacterial chemotaxis

ko02040 - Flagellar assembly

ko03430 - Mismatch repair

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KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00015 - Proline biosynthesis, glutamate => proline

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP

M00086 - beta-Oxidation, acyl-CoA synthesis

M00159 - V-type ATPase, prokaryotes

M00432 - Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate

M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

M00793 - dTDP-L-rhamnose biosynthesis

M00844 - Arginine biosynthesis, ornithine => arginine

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Antibiotic resistance

tetM

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1124.mat