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[Clostridiaceae] bacterium CIM:MAG 987 / [Clostridium] sp. CAG:533

Taxonomy

Species:[Clostridiaceae] bacterium CIM:MAG 987 / [Clostridium] sp. CAG:533
Genus:unclassified_RF39_Mollicutes
Family:unclassified_RF39_Mollicutes
Order:RF39_Mollicutes
Class:Mollicutes
Phylum:Tenericutes

 

Disease Association:

Atherosclerosis (ES=0.490067)

Colorectal cancer (ES=0.314584)
Region Enrichment:Peru, United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00970 - Aminoacyl-tRNA biosynthesis

ko03010 - Ribosome

ko03030 - DNA replication

ko03060 - Protein export

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00086 - beta-Oxidation, acyl-CoA synthesis

M00093 - Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00705 - Multidrug resistance, efflux pump MepA

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Cazyme

CBM50

DOC

GH2

GH23

GH24

GH28

GH31

GH73

GT1

GT2

GT26

GT28

GT4

GT51

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Antibiotic resistance

aph

dfrA

erm

qnr

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1160.mat