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unclassified_RF39_Mollicutes

Taxonomy

Species:unclassified_RF39_Mollicutes
Genus:unclassified_RF39_Mollicutes
Family:unclassified_RF39_Mollicutes
Order:RF39_Mollicutes
Class:Mollicutes
Phylum:Tenericutes

 

Gut outflow:0.303
Region Enrichment:United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00473 - D-Alanine metabolism

ko00511 - Other glycan degradation

ko00550 - Peptidoglycan biosynthesis

ko00710 - Carbon fixation in photosynthetic organisms

ko00970 - Aminoacyl-tRNA biosynthesis

ko03010 - Ribosome

ko03030 - DNA replication

ko03060 - Protein export

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00002 - Glycolysis, core module involving three-carbon compounds

M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P

M00086 - beta-Oxidation, acyl-CoA synthesis

M00140 - C1-unit interconversion, prokaryotes

M00338 - Cysteine biosynthesis, homocysteine + serine => cysteine

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00627 - beta-Lactam resistance, Bla system

M00652 - Vancomycin resistance, D-Ala-D-Ser type

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

aph

dfrA

erm

tetM

van

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1180.mat