| Species: | Atopobium parvulum |
|---|---|
| Genus: | Atopobium |
| Family: | Atopobiaceae |
| Order: | Coriobacteriales |
| Class: | Coriobacteriia |
| Phylum: | Actinobacteria |
| Disease Association: |
Cardiovascular disease (ES=1) Liver cirrhosis (ES=1) NAFLD (ES=0.307019) |
|---|
| Shape | Coccus-shaped |
|---|---|
| Gram staining | Gram+ |
| Motility | Nonmotile |
| Sporulation | Nonsporulating |
| Ecosystem | Human |
| Ecosystem Type | Unclassified; Skin |
In the linked pathways:
red=enriched, blue=depleted
ko00052 - Galactose metabolism
ko00240 - Pyrimidine metabolism
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00970 - Aminoacyl-tRNA biosynthesis
ko02060 - Phosphotransferase system (PTS)
ko03030 - DNA replication
ko03060 - Protein export
ko03410 - Base excision repair
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00018 - Threonine biosynthesis, aspartate => homoserine => threonine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00365 - C10-C20 isoprenoid biosynthesis, archaea
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00550 - Ascorbate degradation, ascorbate => D-xylulose-5P
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00700 - Multidrug resistance, efflux pump AbcA
M00702 - Multidrug resistance, efflux pump NorB
M00704 - Tetracycline resistance, efflux pump Tet38
M00705 - Multidrug resistance, efflux pump MepA
M00793 - dTDP-L-rhamnose biosynthesis
M00843 - L-threo-Tetrahydrobiopterin biosynthesis, GTP => L-threo-BH4
Undetected
Undetected
Undetected
Undetected
MATLAB species model file: msp_1191c.mat
