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unclassified Clostridiales 5

Taxonomy

Species:unclassified Clostridiales 5
Genus:unclassified Clostridiales 5
Family:unclassified Clostridiales 5
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Region Enrichment:United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00300 - Lysine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00550 - Peptidoglycan biosynthesis

ko00670 - One carbon pool by folate

ko00730 - Thiamine metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

ko03440 - Homologous recombination

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00020 - Serine biosynthesis, glycerate-3P => serine

M00021 - Cysteine biosynthesis, serine => cysteine

M00086 - beta-Oxidation, acyl-CoA synthesis

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00159 - V-type ATPase, prokaryotes

M00365 - C10-C20 isoprenoid biosynthesis, archaea

M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine

M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine

M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00704 - Tetracycline resistance, efflux pump Tet38

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

tetM

Virulence factor class

Stress

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Virulence factor gene

Chaperone protein ClpB (ATP-dependent unfoldase) (ID:LmonL_020200001239)

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1298.mat