| Species: | unclassified Ruminococcaceae |
|---|---|
| Genus: | unclassified Ruminococcaceae |
| Family: | Ruminococcaceae |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Disease Association: |
Colorectal cancer (ES=0.325949) |
|---|---|
| Region Enrichment: | Non-westernized (Madagascar, Peru, United Republic of Tanzania) |
In the linked pathways:
red=enriched, blue=depleted
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00511 - Other glycan degradation
ko00550 - Peptidoglycan biosynthesis
ko00970 - Aminoacyl-tRNA biosynthesis
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00021 - Cysteine biosynthesis, serine => cysteine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00086 - beta-Oxidation, acyl-CoA synthesis
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00157 - F-type ATPase, prokaryotes and chloroplasts
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00535 - Isoleucine biosynthesis, pyruvate => 2-oxobutanoate
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00844 - Arginine biosynthesis, ornithine => arginine
M00845 - Arginine biosynthesis, glutamate => acetylcitrulline => arginine
Undetected
Undetected
Undetected
Undetected
MATLAB species model file: msp_1386.mat
