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unclassified_Holdemanella

Taxonomy

Species:unclassified_Holdemanella
Genus:Holdemanella
Family:Erysipelotrichaceae
Order:Erysipelotrichales
Class:Mollicutes 2
Phylum:Tenericutes

 

Region Enrichment:Peru, United Republic of Tanzania

Phenotypes

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00340 - Histidine metabolism

ko00471 - D-Glutamine and D-glutamate metabolism

ko00473 - D-Alanine metabolism

ko00511 - Other glycan degradation

ko00550 - Peptidoglycan biosynthesis

ko00730 - Thiamine metabolism

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KEGG modules

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00018 - Threonine biosynthesis, aspartate => homoserine => threonine

M00020 - Serine biosynthesis, glycerate-3P => serine

M00026 - Histidine biosynthesis, PRPP => histidine

M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

tetM

Virulence factor class

Undetected

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Virulence factor gene

Undetected

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1421.mat