Species: | unclassified Ruminococcaceae |
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Genus: | unclassified Ruminococcaceae |
Family: | Ruminococcaceae |
Order: | Clostridiales |
Class: | Clostridia |
Phylum: | Firmicutes |
Gut outflow: | 0.5 |
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Region Enrichment: | Peru, United Republic of Tanzania |
In the linked pathways:
red=enriched, blue=depleted
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00785 - Lipoic acid metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko03430 - Mismatch repair
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
M00015 - Proline biosynthesis, glutamate => proline
M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine
M00020 - Serine biosynthesis, glycerate-3P => serine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00159 - V-type ATPase, prokaryotes
M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose
M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00844 - Arginine biosynthesis, ornithine => arginine
Undetected
Undetected
Undetected
Undetected
MATLAB species model file: msp_1422.mat