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Lachnoclostridium sp. An118

Taxonomy

Species:Lachnoclostridium sp. An118
Genus:Lachnoclostridium
Family:Lachnospiraceae
Order:Clostridiales
Class:Clostridia
Phylum:Firmicutes

 

Disease Association:

Crohn's disease (ES=0.409461)

Type 2 diabetes (ES=0.603589)

Phenotypes

EcosystemBirds

Abundance overview

Healthy

Mean
Median
Industrialization
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Disease

Mean
Median
Alphabetical

Presence
Abundance
Without outliers
log Abundance


Function overview

KEGG pathways

In the linked pathways:
red=enriched, blue=depleted

ko00290 - Valine, leucine and isoleucine biosynthesis

ko00471 - D-Glutamine and D-glutamate metabolism

ko00550 - Peptidoglycan biosynthesis

ko00730 - Thiamine metabolism

ko00970 - Aminoacyl-tRNA biosynthesis

ko03430 - Mismatch repair

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KEGG modules

M00005 - PRPP biosynthesis, ribose 5P => PRPP

M00010 - Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

M00019 - Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine

M00157 - F-type ATPase, prokaryotes and chloroplasts

M00554 - Nucleotide sugar biosynthesis, galactose => UDP-galactose

M00565 - Trehalose biosynthesis, D-glucose 1P => trehalose

M00570 - Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine

M00579 - Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate

M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P

M00705 - Multidrug resistance, efflux pump MepA

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Antibiotic resistance

tetM

Virulence factor class

Stress

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Virulence factor gene

Chaperone protein ClpB (ATP-dependent unfoldase) (ID:LmonL_020200001239)

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Secondary metabolite

Undetected

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Downloads

MATLAB species model file: msp_1628.mat