| Species: | unclassified Ruminococcus |
|---|---|
| Genus: | Ruminococcus |
| Family: | Ruminococcaceae |
| Order: | Clostridiales |
| Class: | Clostridia |
| Phylum: | Firmicutes |
| Region Enrichment: | Peru |
|---|
In the linked pathways:
red=enriched, blue=depleted
ko00061 - Fatty acid biosynthesis
ko00290 - Valine, leucine and isoleucine biosynthesis
ko00300 - Lysine biosynthesis
ko00450 - Selenocompound metabolism
ko00471 - D-Glutamine and D-glutamate metabolism
ko00473 - D-Alanine metabolism
ko00521 - Streptomycin biosynthesis
ko00550 - Peptidoglycan biosynthesis
ko00670 - One carbon pool by folate
ko00710 - Carbon fixation in photosynthetic organisms
ko00730 - Thiamine metabolism
ko00780 - Biotin metabolism
ko00785 - Lipoic acid metabolism
ko00970 - Aminoacyl-tRNA biosynthesis
ko03030 - DNA replication
ko03060 - Protein export
ko03430 - Mismatch repair
ko03440 - Homologous recombination
M00002 - Glycolysis, core module involving three-carbon compounds
M00005 - PRPP biosynthesis, ribose 5P => PRPP
M00007 - Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
M00015 - Proline biosynthesis, glutamate => proline
M00016 - Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
M00050 - Guanine ribonucleotide biosynthesis IMP => GDP,GTP
M00063 - CMP-KDO biosynthesis
M00086 - beta-Oxidation, acyl-CoA synthesis
M00096 - C5 isoprenoid biosynthesis, non-mevalonate pathway
M00115 - NAD biosynthesis, aspartate => NAD
M00159 - V-type ATPase, prokaryotes
M00525 - Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
M00526 - Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
M00527 - Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
M00549 - Nucleotide sugar biosynthesis, glucose => UDP-glucose
M00632 - Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P
M00705 - Multidrug resistance, efflux pump MepA
M00793 - dTDP-L-rhamnose biosynthesis
Undetected
Undetected
Undetected
MATLAB species model file: msp_1833.mat
